This skill guides you through proper dictionary-based gene set enrichment in OmicVerse, ensuring correct data formats and error-free analysis.

This skill helps you generate publication-quality matplotlib and seaborn visualizations for bioinformatics data, supporting multi-panel layouts and

This skill exports bioinformatics results and tables to formatted Excel files using openpyxl, running locally for compatibility with all LLM providers.

This skill reconstructs single-cell profiles from bulk RNA-seq using Bulk2Single, trains a beta-VAE, and benchmarks against reference scRNA-seq.

This skill harmonises bulk RNA-seq data across batches using ComBat, exports corrected matrices, and benchmarks pre/post correction visually.

This skill creates professional PDF reports with text, tables, and embedded images using reportlab, enabling local, provider-agnostic analysis documentation.

This skill maps single-cell references to spatial transcriptomics profiles, enabling spot-level reconstruction, marker visualization, and downstream reporting.

This skill guides you through loading TCGA data, initializing metadata, and exporting annotated AnnData while enabling survival analyses.

This skill provides quick, actionable guidance to integrate and visualize single-cell multi-omics data across MOFA, GLUE, SIMBA, TOSICA, and StaVIA.

This skill guides you through bulk RNA-seq differential expression analysis in omicverse, from gene ID mapping to visualization and pathway enrichment.

This skill guides you through single-cell annotation workflows from SCSA to GPTAnno and weighted transfer, enabling accurate cell type labeling.

This skill quantifies ligand-receptor communication in annotated single-cell data using CellPhoneDB v5 and generates CellChat-style visualizations for

This skill helps you query STRING for protein interactions, build PPI networks with pyPPI, and render styled network figures from gene lists.

This skill helps you automate Xiaohongshu operations from topic research to post-recovery, delivering reusable templates and case presets for scalable growth.

This skill helps migrate better-result TaggedError classes from v1 to v2 by generating type-safe refactors and updated usage.

This skill guides migrating error handling to a typed Result-based approach, converting try/catch to Result.try and applying railway-oriented patterns.

This skill ensures TTS worker errors are reported to the main process to trigger user-friendly toasts and prevent silent failures.

This skill helps you diagnose and fix DOM race conditions and optimistic UI in vanilla JavaScript across Live2D and VRM components, improving reliability.

This skill pushes local commits to an existing PR source branch without creating new branches, ensuring compliant and gap-free updates.

This skill helps you detect and fix hardcoded Chinese text and synchronize translations across languages in i18n projects.

This skill helps you apply Capsule UI and Neko Blue branding guidelines to your interfaces, ensuring cohesive visuals and accessible interactions.